• Complex
  • Title
  • Keyword
  • Abstract
  • Scholars
  • Journal
  • ISSN
  • Conference
搜索

Author:

Kong Ren (Kong Ren.) | Xu Xue-Mei (Xu Xue-Mei.) | Chen Wei-Zu (Chen Wei-Zu.) | Wang Cun-Xin (Wang Cun-Xin.) | Hu Li-Ming (Hu Li-Ming.) (Scholars:胡利明)

Indexed by:

Scopus SCIE PKU CSCD

Abstract:

A three-dimensional pharmacophore model was developed for a considerable number of pytrolidine-based and butane-based chemokine (C-C motif) receptor 5(CCR5) antagonists, which can block the entry of human immunodeficiency virus type 1 (HIV-1) by inhibiting the interaction of HIV-1 envelope protein and CCR5. The pharmacophore model was generated using a training set consisting of 25 carefully selected antagonists with the diverse molecular architecture and bioactivity, as required by the Catalyst/HypoGen program. The activity of the training set molecules expressed in IC50 (half-inhibitory concentration) covered from 0.06 to 10000 nmol . L-1. The most predictive pharmacophore model (Hypo 1), consisting of two positive ionizable points and three hydrophobic groups, had a correlation of 0.924 and a root mean square of 1.068, and a cost difference of 63.67 bits between the null cost and the total cost. The model was applied in predicting the activity of 74 compounds as a test set. The results indicated that the model was able to provide clear guidelines and accurate activity prediction for novel antagonist design.

Keyword:

HIV-1 CCR5 ligand-based drug design pharmacophore model

Author Community:

  • [ 1 ] Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100022, Peoples R China

Reprint Author's Address:

  • [Wang Cun-Xin]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100022, Peoples R China

Show more details

Related Keywords:

Source :

ACTA PHYSICO-CHIMICA SINICA

ISSN: 1000-6818

Year: 2007

Issue: 9

Volume: 23

Page: 1325-1331

1 0 . 9 0 0

JCR@2022

ESI Discipline: CHEMISTRY;

JCR Journal Grade:4

Cited Count:

WoS CC Cited Count: 1

SCOPUS Cited Count: 1

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 4

Online/Total:648/10707268
Address:BJUT Library(100 Pingleyuan,Chaoyang District,Beijing 100124, China Post Code:100124) Contact Us:010-67392185
Copyright:BJUT Library Technical Support:Beijing Aegean Software Co., Ltd.