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Author:

Li, Hangeng (Li, Hangeng.) | Duan, Yanhua (Duan, Yanhua.) | Li, Qingshou (Li, Qingshou.) | Ruan, Xiaogang (Ruan, Xiaogang.)

Indexed by:

CPCI-S

Abstract:

selecting a subset of marker genes from thousands of genes is an important topic in microarray experiments for diseases classification and prediction. The SVM-RFE is popularly employed to select feature. In this paper, we proposed a hybrid approach to select marker genes for tumor classification. Firstly, filter method was employed to selected informative genes, and then we improved the standard SVM-REF to extract feature genes from the small set of informative genes. The improved SVM-RFE accelerates without reducing accuracy the standard support vector machine recursive feature elimination method. Our method has been implemented on ALL/AML dataset, and the results have shown that our method can achieve to select few of marker genes with minimum redundancy but getting better classification accuracy.

Keyword:

feature selection SVM-RFE tumor classification gene expression

Author Community:

  • [ 1 ] [Li, Hangeng]Beijing Univ Technol, Sch Elect Informat & Control Engn, Beijing 100022, Peoples R China
  • [ 2 ] [Duan, Yanhua]Beijing Univ Technol, Sch Elect Informat & Control Engn, Beijing 100022, Peoples R China
  • [ 3 ] [Li, Qingshou]Beijing Univ Technol, Sch Elect Informat & Control Engn, Beijing 100022, Peoples R China
  • [ 4 ] [Ruan, Xiaogang]Beijing Univ Technol, Sch Elect Informat & Control Engn, Beijing 100022, Peoples R China

Reprint Author's Address:

  • [Li, Hangeng]Beijing Univ Technol, Sch Elect Informat & Control Engn, Beijing 100022, Peoples R China

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Source :

PROGRESS IN INTELLIGENCE COMPUTATION AND APPLICATIONS, PROCEEDINGS

Year: 2007

Page: 422-424

Language: English

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 8

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