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Author:

Sun, Ting Guang (Sun, Ting Guang.) | Li, Chun Hua (Li, Chun Hua.) | Chen, Wei Zu (Chen, Wei Zu.) | Wang, Cun Xin (Wang, Cun Xin.)

Indexed by:

Scopus SCIE

Abstract:

The Glutamine transfer system consists of three components: glutamine binding protein (GlnBP), the transmembrame receptor (TMR) and the ATP binding subunit. it is typical of periplasmic transfer systems in Escherichia coli and belongs to the ABC (ATP-binding cassettes) super family. Until now, the mechanism of glutamine release from its receptor remains unknown, also little information is available on the interactions between the substrate-bound complex and the TMR because of a lack of structure information of the TMR. In our study, a steered molecular dynamics (SMD) method is used to explore the possible pathway for glutamine release from its receptor GlnBP. It is found that a novel back-door pathway, rather than a front-door pathway is more reasonable. This work may help understand the substrate release mechanism of the periplasmic transfer system and additionally give some clues as to how the substrate-bound complex binds to its TMR and completes the subsequent translocation of the substrate. (c) 2009 Published by Elsevier B.V.

Keyword:

SMD Periplasmic binding protein ABC transporter Back-door pathway GlnBP Glutamine transfer system

Author Community:

  • [ 1 ] [Sun, Ting Guang]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100124, Peoples R China
  • [ 2 ] [Li, Chun Hua]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100124, Peoples R China
  • [ 3 ] [Chen, Wei Zu]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100124, Peoples R China
  • [ 4 ] [Wang, Cun Xin]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100124, Peoples R China

Reprint Author's Address:

  • [Wang, Cun Xin]Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100124, Peoples R China

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Source :

JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM

ISSN: 0166-1280

Year: 2009

Issue: 1-3

Volume: 905

Page: 51-58

JCR Journal Grade:3

CAS Journal Grade:1

Cited Count:

WoS CC Cited Count: 3

SCOPUS Cited Count: 4

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 1

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