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Author:

Liu, Q.-J. (Liu, Q.-J..) | Li, Y.-X. (Li, Y.-X..) | Ruan, X.-G. (Ruan, X.-G..)

Indexed by:

Scopus PKU CSCD

Abstract:

In this paper, the problem of informative gene selection from broad patterns of gene expression data was studied using the method of sensitivity analysis based on neural networks with single hidden layer. First, noise genes were removed with small weighted Bhattacharyya distance. Secondly, the sensitivity analysis with neural networks was employed to generate candidate feature subsets. Finally, the candidate feature subsets were evaluated by cross validation and independent test and the candidate feature subset with minimum errors was selected as the informative gene set. The proposed method was applied in classifying four subtypes of small round blue cell tumor gene expression profiles. The result demonstrated the feasibility and effectiveness of the method.

Keyword:

BP neural networks; Feature selection; Gene expression profile; Sensitivity analysis; Tumor

Author Community:

  • [ 1 ] [Liu, Q.-J.]School of Physics and Electronic Englinering, Anqing Normal College, Anqing 246011, China
  • [ 2 ] [Li, Y.-X.]CCD Item, Beijing Jingwei Textile Machinery New Technology Co. Ltd., Beijing 100176, China
  • [ 3 ] [Ruan, X.-G.]School of Electronic Information and Control Engineering, Beijing University of Technology, Beijing 100022, China

Reprint Author's Address:

  • [Liu, Q.-J.]School of Physics and Electronic Englinering, Anqing Normal College, Anqing 246011, China

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Source :

Chinese Journal of Biomedical Engineering

ISSN: 0258-8021

Year: 2008

Issue: 5

Volume: 27

Page: 710-715

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 10

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