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Author:

Chen Lei (Chen Lei.) | Gong Wei-Kang (Gong Wei-Kang.) | Li Chun-Hua (Li Chun-Hua.) (Scholars:李春华)

Indexed by:

Scopus SCIE

Abstract:

ObjectiveOpioid receptor,a kind of G protein-coupled receptors(GPCRs),mainly mediates ananalgesic responseviaallosterically transducing the signal of endogenous ligand binding in the extracellulardomain to couple to effector proteins in the intracellular domain.delta opioid receptor(DOP)is associated withemotional control besides pain control,which makes it an attractive therapeutic target.However,its allostericmechanism and key residues responsible for structural stability and signal transmission are not completely clear.This paper aims to analyze the structural dynamics and allosteric effects of DOP.MethodsFirstly,therelationships between DOP structure dynamics and function were explored by means of residue fluctuations inslow motion mode and fast motion mode from the anisotropic network model(ANM).Then,perturbationresponse scanning(PRS)was used to identify key residues related to allosteric communication in DOP.ResultsThe DOP segments and functional sodium-binding sites can be well identified by the slowest motionmodes,and the key residues that play a crucial role in protein structural stability can be identified by the fastestmotion modes.Correlation analysis of residue motions reveals positive correlations between extracellular/intracellular transmembrane helices and loops,which promote the DOP structural stability and the binding ofDOP with ligands.Key residues with high sensitivity and high effectiveness in PRS analysis play an importantrole in the allosteric communication of DOP.ConclusionThis work sheds light on the allosteric communicationmechanism of delta opioid receptor and provides valuable information for drug design

Keyword:

?opioid receptor(DOP) anisotropic network model allosteric mechanism dynamics perturbation-response scanning

Author Community:

  • [ 1 ] [Chen Lei]Beijing Univ Technol, Fac Environm & Life Sci, Beijing 100124, Peoples R China
  • [ 2 ] [Gong Wei-Kang]Beijing Univ Technol, Fac Environm & Life Sci, Beijing 100124, Peoples R China
  • [ 3 ] [Li Chun-Hua]Beijing Univ Technol, Fac Environm & Life Sci, Beijing 100124, Peoples R China

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Source :

PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS

ISSN: 1000-3282

Year: 2022

Issue: 6

Volume: 49

Page: 1146-1154

0 . 3

JCR@2022

0 . 3 0 0

JCR@2022

ESI Discipline: BIOLOGY & BIOCHEMISTRY;

ESI HC Threshold:43

JCR Journal Grade:4

CAS Journal Grade:4

Cited Count:

WoS CC Cited Count: 0

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 8

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