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Author:

Ren, X. (Ren, X..) | Wu, Y. (Wu, Y..) | Deng, R. (Deng, R..) | Li, J. (Li, J..)

Indexed by:

Scopus

Abstract:

We present a powerful method for direct mRNA detection based on ligation-based recognition and in situ amplification, capable of single-cell imaging mRNA at single-nucleotide and single-molecule resolution. Attributed to the use of Splint R ligase that can ligate padlock probe with RNA as target template, this method can efficiently detect mRNA in the absence of reverse transcription. This method enables spatial localization and correlation analysis of gene expression in single cells, which helps us to elucidate gene function and regulatory mechanisms. © 2024. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Keyword:

Single molecule Single-cell imaging Rolling circle amplification In situ imaging

Author Community:

  • [ 1 ] [Ren X.]Department of Chemistry, College of Chemistry and Life Science, Beijing University of Technology, Beijing, China
  • [ 2 ] [Wu Y.]Department of Chemistry, College of Chemistry and Life Science, Beijing University of Technology, Beijing, China
  • [ 3 ] [Deng R.]College of Biomass Science and Engineering, Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China
  • [ 4 ] [Li J.]Beijing Life Science Academy, Beijing, China
  • [ 5 ] [Li J.]Department of Chemistry, Center for BioAnalytical Chemistry, Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, China
  • [ 6 ] [Li J.]New Cornerstone Science Laboratory, Shenzhen, China
  • [ 7 ] [Li J.]Center for BioAnalytical Chemistry, Hefei National Laboratory of Physical Science at Microscale, University of Science and Technology of China, Hefei, China

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Source :

Methods in molecular biology (Clifton, N.J.)

ISSN: 1940-6029

Year: 2024

Volume: 2822

Page: 65-75

Cited Count:

WoS CC Cited Count:

SCOPUS Cited Count:

ESI Highly Cited Papers on the List: 0 Unfold All

WanFang Cited Count:

Chinese Cited Count:

30 Days PV: 5

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